ncem
stable
Contents:
ncem
Installation
API
Estimator classes:
estimators
ncem.estimators.Estimator
ncem.estimators.Estimator.img_keys_all
ncem.estimators.Estimator.nodes_idx_all
ncem.estimators.Estimator.nodes_idx_eval
ncem.estimators.Estimator.nodes_idx_test
ncem.estimators.Estimator.nodes_idx_train
ncem.estimators.Estimator.patient_ids_bytarget
ncem.estimators.Estimator.patient_ids_unique
ncem.estimators.Estimator.img_to_patient_dict
ncem.estimators.Estimator.complete_img_keys
ncem.estimators.Estimator.a
ncem.estimators.Estimator.h_0
ncem.estimators.Estimator.h_1
ncem.estimators.Estimator.size_factors
ncem.estimators.Estimator.graph_covar
ncem.estimators.Estimator.node_covar
ncem.estimators.Estimator.domains
ncem.estimators.Estimator.covar_selection
ncem.estimators.Estimator.node_types
ncem.estimators.Estimator.node_type_names
ncem.estimators.Estimator.graph_covar_names
ncem.estimators.Estimator.node_feature_names
ncem.estimators.Estimator.n_features_type
ncem.estimators.Estimator.n_features_standard
ncem.estimators.Estimator.n_features_0
ncem.estimators.Estimator.n_features_1
ncem.estimators.Estimator.n_graph_covariates
ncem.estimators.Estimator.n_node_covariates
ncem.estimators.Estimator.n_domains
ncem.estimators.Estimator.max_nodes
ncem.estimators.Estimator.n_eval_nodes_per_graph
ncem.estimators.Estimator.vi_model
ncem.estimators.Estimator.log_transform
ncem.estimators.Estimator.model_type
ncem.estimators.Estimator.adj_type
ncem.estimators.Estimator.cond_type
ncem.estimators.Estimator.cond_depth
ncem.estimators.Estimator.output_layer
ncem.estimators.Estimator.steps_per_epoch
ncem.estimators.Estimator.validation_steps
ncem.estimators.Estimator.evaluate_any
ncem.estimators.Estimator.evaluate_per_node_type
ncem.estimators.Estimator.get_data
ncem.estimators.Estimator.init_model
ncem.estimators.Estimator.predict
ncem.estimators.Estimator.pretrain_decoder
ncem.estimators.Estimator.split_data_given
ncem.estimators.Estimator.split_data_node
ncem.estimators.Estimator.split_data_target_cell
ncem.estimators.Estimator.train
ncem.estimators.Estimator.train_aggressive
ncem.estimators.Estimator.train_normal
ncem.estimators.EstimatorGraph
ncem.estimators.EstimatorNoGraph
ncem.estimators.EstimatorCVAE
ncem.estimators.EstimatorCVAEncem
ncem.estimators.EstimatorED
ncem.estimators.EstimatorEDncem
ncem.estimators.EstimatorInteractions
ncem.estimators.EstimatorLinear
Model classes:
models
Train:
train
Tutorials
Ecosystem
Reference
Contributor Guide
Credits
Contributor Covenant Code of Conduct
ncem
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ncem.estimators.Estimator
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ncem.estimators.Estimator.size_factors
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ncem.estimators.Estimator.size_factors
Estimator.
size_factors
:
Dict
[
str
,
ndarray
]